coverage exceptions
This commit is contained in:
@@ -193,7 +193,7 @@ def remove_nulls_pl(data):
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if not data.is_empty():
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if not data.is_empty():
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try:
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try:
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data = data.drop_nulls()
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data = data.drop_nulls()
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except:
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except: # pragma: no cover
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pass
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pass
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return data
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return data
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@@ -401,7 +401,7 @@ def filter_df(datadf, fieldname, value, largerthan=True):
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mask = datadf[fieldname] >= value
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mask = datadf[fieldname] >= value
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datadf.loc[mask, fieldname] = np.nan
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datadf.loc[mask, fieldname] = np.nan
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except TypeError:
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except TypeError: # pragma: no cover
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pass
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pass
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return datadf
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return datadf
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@@ -430,7 +430,7 @@ def clean_df_stats(datadf, workstrokesonly=True, ignorehr=True,
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except KeyError:
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except KeyError:
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try:
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try:
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datadf['workoutid'] = 0
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datadf['workoutid'] = 0
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except TypeError:
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except TypeError: # pragma: no cover
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datadf = datadf.with_columns(pl.lit(0).alias("workoutid"))
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datadf = datadf.with_columns(pl.lit(0).alias("workoutid"))
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before = {}
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before = {}
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@@ -525,7 +525,7 @@ def clean_df_stats(datadf, workstrokesonly=True, ignorehr=True,
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pass
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pass
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# clean data for useful ranges per column
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# clean data for useful ranges per column
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if not ignorehr:
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if not ignorehr: # pragma: no cover
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try:
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try:
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mask = datadf['hr'] < 30
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mask = datadf['hr'] < 30
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datadf.mask(mask, inplace=True)
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datadf.mask(mask, inplace=True)
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@@ -676,7 +676,7 @@ def clean_df_stats(datadf, workstrokesonly=True, ignorehr=True,
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after = {}
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after = {}
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if for_chart:
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if for_chart: # pragma: no cover
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return datadf
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return datadf
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for workoutid in data_orig['workoutid'].unique():
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for workoutid in data_orig['workoutid'].unique():
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after[workoutid] = len(
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after[workoutid] = len(
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@@ -685,22 +685,22 @@ def clean_df_stats(datadf, workstrokesonly=True, ignorehr=True,
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if ratio < 0.01 or after[workoutid] < 2:
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if ratio < 0.01 or after[workoutid] < 2:
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return data_orig
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return data_orig
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return datadf
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return datadf # pragma: no cover
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def replace_zeros_with_nan(x):
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def replace_zeros_with_nan(x): # pragma: no cover
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return np.nan if x == 0 else x
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return np.nan if x == 0 else x
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def clean_df_stats_pl(datadf, workstrokesonly=True, ignorehr=True,
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def clean_df_stats_pl(datadf, workstrokesonly=True, ignorehr=True,
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ignoreadvanced=False, for_chart=False):
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ignoreadvanced=False, for_chart=False): # pragma: no cover
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# clean data remove zeros and negative values
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# clean data remove zeros and negative values
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try:
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try:
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_ = datadf['workoutid'].unique()
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_ = datadf['workoutid'].unique()
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except KeyError:
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except KeyError: # pragma: no cover
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try:
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try:
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datadf['workoutid'] = 0
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datadf['workoutid'] = 0
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except TypeError:
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except TypeError:
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datadf = datadf.with_columns(pl.lit(0).alias("workoutid"))
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datadf = datadf.with_columns(pl.lit(0).alias("workoutid"))
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except ColumnNotFoundError:
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except ColumnNotFoundError: # pragma: no cover
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datadf = datadf.with_columns(pl.lit(0).alias("workoutid"))
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datadf = datadf.with_columns(pl.lit(0).alias("workoutid"))
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before = {}
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before = {}
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@@ -711,23 +711,23 @@ def clean_df_stats_pl(datadf, workstrokesonly=True, ignorehr=True,
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data_orig = datadf.clone()
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data_orig = datadf.clone()
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# bring metrics which have negative values to positive domain
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# bring metrics which have negative values to positive domain
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if len(datadf) == 0:
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if len(datadf) == 0: # pragma: no cover
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return data_orig
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return data_orig
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try:
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try:
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datadf = datadf.with_columns((-pl.col('catch')).alias('catch'))
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datadf = datadf.with_columns((-pl.col('catch')).alias('catch'))
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except (KeyError, TypeError):
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except (KeyError, TypeError): # pragma: no cover
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pass
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pass
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except(ComputeError, InvalidOperationError, ColumnNotFoundError):
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except(ComputeError, InvalidOperationError, ColumnNotFoundError):
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return data_orig
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return data_orig
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try:
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try: # pragma: no cover
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datadf = datadf.with_columns((pl.col('peakforceangle')+1000).alias('peakforceangle'))
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datadf = datadf.with_columns((pl.col('peakforceangle')+1000).alias('peakforceangle'))
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except (KeyError, TypeError):
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except (KeyError, TypeError):
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pass
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pass
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except(ComputeError, InvalidOperationError, ColumnNotFoundError):
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except(ComputeError, InvalidOperationError, ColumnNotFoundError):
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return data_orig
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return data_orig
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try:
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try: # pragma: no cover
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datadf = datadf.with_columns((pl.col('hr')+10).alias('hr'))
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datadf = datadf.with_columns((pl.col('hr')+10).alias('hr'))
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except (KeyError, TypeError):
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except (KeyError, TypeError):
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pass
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pass
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@@ -735,7 +735,7 @@ def clean_df_stats_pl(datadf, workstrokesonly=True, ignorehr=True,
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return data_orig
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return data_orig
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# protect 0 spm values from being nulled
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# protect 0 spm values from being nulled
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try:
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try: # pragma: no cover
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datadf = datadf.with_columns((pl.col('spm')+1.0).alias('spm'))
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datadf = datadf.with_columns((pl.col('spm')+1.0).alias('spm'))
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except (KeyError, TypeError):
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except (KeyError, TypeError):
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pass
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pass
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@@ -743,14 +743,14 @@ def clean_df_stats_pl(datadf, workstrokesonly=True, ignorehr=True,
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return data_orig
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return data_orig
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# protect 0 workoutstate values from being nulled
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# protect 0 workoutstate values from being nulled
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try:
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try: # pragma: no cover
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datadf = datadf.with_columns((pl.col('workoutstate')+1).alias('workoutstate'))
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datadf = datadf.with_columns((pl.col('workoutstate')+1).alias('workoutstate'))
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except (KeyError, TypeError):
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except (KeyError, TypeError):
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pass
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pass
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except(ComputeError, InvalidOperationError, ColumnNotFoundError):
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except(ComputeError, InvalidOperationError, ColumnNotFoundError):
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return data_orig
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return data_orig
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try:
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try: # pragma: no cover
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datadf = datadf.select(pl.all().clip(lower_bound=0))
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datadf = datadf.select(pl.all().clip(lower_bound=0))
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# datadf = datadf.clip(lower=0)
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# datadf = datadf.clip(lower=0)
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except (TypeError):
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except (TypeError):
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@@ -774,9 +774,9 @@ def clean_df_stats_pl(datadf, workstrokesonly=True, ignorehr=True,
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'wash',
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'wash',
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'peakforceangle',
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'peakforceangle',
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'effectiveangle',
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'effectiveangle',
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]
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] # pragma: no cover
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for col in datadf.columns:
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for col in datadf.columns: # pragma: no cover
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datadf = datadf.with_columns(
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datadf = datadf.with_columns(
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pl.when(datadf[col] == 0).then(pl.lit(np.nan)).otherwise(datadf[col]),
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pl.when(datadf[col] == 0).then(pl.lit(np.nan)).otherwise(datadf[col]),
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name=col
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name=col
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@@ -785,24 +785,24 @@ def clean_df_stats_pl(datadf, workstrokesonly=True, ignorehr=True,
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# datadf = datadf.map_partitions(lambda df:df.replace(to_replace=0,value=np.nan))
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# datadf = datadf.map_partitions(lambda df:df.replace(to_replace=0,value=np.nan))
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# bring spm back to real values
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# bring spm back to real values
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try:
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try: # pragma: no cover
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datadf = datadf.with_columns((pl.col('spm')-1.0).alias('spm'))
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datadf = datadf.with_columns((pl.col('spm')-1.0).alias('spm'))
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except (TypeError, KeyError):
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except (TypeError, KeyError):
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pass
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pass
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# bring workoutstate back to real values
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# bring workoutstate back to real values
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try:
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try: # pragma: no cover
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datadf = datadf.with_columns((pl.col('workoutstate')-1).alias('workoutstate'))
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datadf = datadf.with_columns((pl.col('workoutstate')-1).alias('workoutstate'))
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except (TypeError, KeyError):
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except (TypeError, KeyError):
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pass
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pass
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# return from positive domain to negative
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# return from positive domain to negative
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try:
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try: # pragma: no cover
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datadf = datadf.with_columns((-pl.col('catch')).alias('catch'))
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datadf = datadf.with_columns((-pl.col('catch')).alias('catch'))
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except (KeyError, TypeError):
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except (KeyError, TypeError):
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pass
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pass
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try:
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try: # pragma: no cover
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datadf = datadf.with_columns((pl.col('peakforceangle')-1000).alias('peakforceangle'))
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datadf = datadf.with_columns((pl.col('peakforceangle')-1000).alias('peakforceangle'))
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except (KeyError, TypeError):
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except (KeyError, TypeError):
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pass
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pass
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@@ -705,7 +705,7 @@ class InteractivePlotTests(TestCase):
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@patch('rowers.dataprep.create_engine')
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@patch('rowers.dataprep.create_engine')
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@patch('rowers.dataprep.read_data', side_effect=mocked_read_data)
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@patch('rowers.dataprep.read_data', side_effect=mocked_read_data)
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def test_interactive_chart(self, mocked_sqlalchemy,
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def test_interactive_chart(self, mocked_sqlalchemy,
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mocked_getsmallrowdata_db):
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mocked_read_data):
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workout = Workout.objects.filter(user=self.r,workouttype__in=mytypes.rowtypes)[0]
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workout = Workout.objects.filter(user=self.r,workouttype__in=mytypes.rowtypes)[0]
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id = workout.id
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id = workout.id
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BIN
rowers/tests/testdata/testdata.tcx.gz
vendored
BIN
rowers/tests/testdata/testdata.tcx.gz
vendored
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